.. 4DGB documentation master file, created by
   sphinx-quickstart on Tue Aug  2 16:56:41 2022.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

4D Genome Browser Documentation
===============================

.. toctree::
   :maxdepth: 2
   :Caption: The 4D Genome Browser

   browser/start

.. toctree::
   :maxdepth: 2
   :Caption: The 4DGB Workflow Tool

   workflow/start
   workflow/installation
   workflow/example
   workflow/minimalexample
   workflow/project
   workflow/files
   workflow/copy
   workflow/windows

.. toctree::
   :maxdepth: 2
   :Caption: File Conversion and Preprocessing

   scripts/hic-converter
   scripts/musX
   scripts/embryo
   scripts/a549
   scripts/useful
   scripts/workcited